Insertion junction: CLIP2.070530_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070530
Chromosome:chromosome 3
Location:8211389
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g200250 ICL3 Putative isocitrate lyase/malate synthase; (1 of 1) 2.7.8.23 - Carboxyvinyl-carboxyphosphonate phosphorylmutase / CPEP phosphonomutase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTTGTTTGAGGGAGCACTTGGGAGGTACCATGGCGCAACACACGACCG
Internal bar code:CAATCTATTGACGGGCTATAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1269
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCCCTCCTAGCAAGCAT
Suggested primer 2:GCATTAGGAAAGCGCAAGGG