Insertion cassette: | CIB2 |
Side of cassette: | 5' |
Strand: | + |
Strain: | CLIP2.070531 |
Chromosome: | chromosome 13 |
Location: | 1196480 |
Confidence (%): | 80 |
Locus systematic id | Locus common name | Defline | Feature |
---|---|---|---|
Cre13.g569850 | AMT4,AMT1D | Ammonium transporter; (1 of 8) K03320 - ammonium transporter, Amt family (amt, AMT, MEP) | 3'UTR |
Cre13.g569900 | (1 of 100) IPR001810 - F-box domain | 3'UTR |
Insertion site details | |
Expected flanking sequence (starting at cassette; orientation from cassette outwards): | CAATTTCACAACATGTAGGCTTCGTCACTTGCATTCACGTCAGGGCATCC |
Internal bar code: | ATTTCTAACTGGGAAGCTGAAG |
Confirmation - LEAP-Seq | |
LEAP-Seq distance: | 2072 |
LEAP-Seq percent confirming: | 100.0 |
LEAP-Seq n confirming: | 25 |
LEAP-Seq n nonconfirming: | 0 |
LEAP-Seq n unique pos: | 25 |
Suggested primers for confirmation by PCR | |
Suggested primer 1: | AGCTGGCTCAGTAACTGCAG |
Suggested primer 2: | AACTTGTTTCACTCACGCGC |