Insertion junction: CLIP2.070536_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070536
Chromosome:chromosome 6
Location:7960698
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre06.g800745 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAAACCGCCCTGTGTCATCCCGTGTCATCCCGTGTCATCATCTCCAAAC
Internal bar code:AGTCCGACAATCCGAAACAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:514
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGTTGACAACTGTGCTG
Suggested primer 2:CTTGCAAGGGAAAAGTGGGC