Insertion junction: CLIP2.070546_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070546
Chromosome:chromosome 8
Location:710145
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g360550 ERM3,NIRK,NIRK1 Copper-containing nitrite reductase, mitochondrial; (1 of 1) 1.7.2.1 - Nitrite reductase (NO-forming) / Pseudomonas cytochrome oxidase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTTGGGGTCCTTTGTCGGACTGGGCCTGCTGCCGTAATGACTAAGCAAT
Internal bar code:GAAATGCTAAAGGACCCATGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:352
LEAP-Seq percent confirming:94.4444
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTACAAGAACCCCTGCT
Suggested primer 2:TGAATCTGCGTTACCTGCGT