Insertion junction: CLIP2.070550_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070550
Chromosome:chromosome 3
Location:7590143
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g204752 (1 of 1) K00565 - mRNA (guanine-N7-)-methyltransferase (RNMT) 3'UTR
Cre03.g800391 (1 of 3) 2.7.8.11 - CDP-diacylglycerol--inositol 3-phosphatidyltransferase / Phosphatidylinositol synthase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAACTATCTTCATGAGCGTCCGGTTGTTGGGATGGGGTTAGCGTCCCT
Internal bar code:CGTTTCTCGCGTAACTTTAAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2391
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGAAGGAGGAGGAGGAGCAG
Suggested primer 2:ATGTCTTGCAACCGGCTGTA