Insertion junction: CLIP2.070551_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070551
Chromosome:chromosome 9
Location:5232212
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre09.g407050 MMP24 Matrix metalloproteinase; (1 of 40) 3.4.24.38 - Gametolysin / Lysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACGGTATCACTCCACAAAAAAATGTTCCCCGTCATGTACAGAATTTG
Internal bar code:GATTACTGGATTTCCTTCTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:161
LEAP-Seq percent confirming:77.7778
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGGAGGAGGAGGAGGTT
Suggested primer 2:CTTCCCCAACCACCATCTCC