Insertion junction: CLIP2.070556_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070556
Chromosome:chromosome 2
Location:1191264
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g081400 BCA1 Branched chain amino acid aminotransferase; (1 of 1) 2.6.1.88 - Methionine transaminase / Methionine-oxo-acid transaminase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGAGTCGACACCCTGAGCCCCCTTGTTTTAGCCCGTCGTCTTGGACGC
Internal bar code:GGGATGCGCCCGTGAGTGCTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2290
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:64
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:AGATGGAGGGGCTCATTCCT
Suggested primer 2:AAACGCGTGAAACAGCTGTC