Insertion junction: CLIP2.070560_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070560
Chromosome:chromosome 12
Location:4101155
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g801402 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGTCCATGTCCATCGACGGGACATCAGGCGAGCTGAAGCTCCATGTGG
Internal bar code:GGTAGGCAACGGACGTTCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2289
LEAP-Seq percent confirming:62.5
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCAACAGGGCAAACACCATG
Suggested primer 2:GCGTCATGCCGAATTTCTCC