Insertion junction: CLIP2.070565_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070565
Chromosome:chromosome 6
Location:5629354
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g287600 (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTGAAGTAGGTGCCGCAACGTCTCTGTTAAGGGCAAGTGATGCTTACCG
Internal bar code:GTGAGATTGGCGTAGGTTAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1033
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCTGCACAATCAGTAGGT
Suggested primer 2:CGGATCAAGATCTTCGCGGA