Insertion junction: CLIP2.070578_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070578
Chromosome:chromosome 12
Location:5290312
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g528150 OST3 (1 of 2) PF04756 - OST3 / OST6 family (OST3_OST6); Oligosaccharyl transferase complex subunit 3 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCACCGTATCAAGAGTCTATGCAGTGGCAACCATTTCACGAGCACAGC
Internal bar code:ATCCAAGCTGTGAACGACGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:5036
LEAP-Seq percent confirming:97.5309
LEAP-Seq n confirming:79
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCTCCTGATAGCCTGACT
Suggested primer 2:AGGACGCTCTGTACCCTGAT