Insertion junction: CLIP2.070581_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070581
Chromosome:chromosome 12
Location:5086260
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre12.g525750 (1 of 8) IPR000719//IPR002290//IPR011009//IPR020635//IPR020636 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Calcium/calmodulin-dependent/calcium-dependent protein kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGCAAACGCAATGCCCTAGCGACGCACCACGGCCTGCCAGCTGTGCCAT
Internal bar code:TGGTACTGTAGTAGAATCGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2650
LEAP-Seq percent confirming:23.4043
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:36
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CATGGCGCTCTTCATCAAGC
Suggested primer 2:GCTGTGTCCAACAAGTGCTG