Insertion junction: CLIP2.070590_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070590
Chromosome:chromosome 2
Location:4354828
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g105287 (1 of 1) PF13821 - Domain of unknown function (DUF4187) (DUF4187) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCCTCTACTTCCCCCTCACTTCATTGCACACACGGACACGCCCCTCA
Internal bar code:ATGGGTCATGGTGGTGGGTGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:554
LEAP-Seq percent confirming:58.8235
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGGGCATGAGAAAGGCAG
Suggested primer 2:GCCAAACATTGTGTGCTCGT