Insertion junction: CLIP2.070600_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070600
Chromosome:chromosome 3
Location:6731830
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196150 uL5m,MRPL5 (1 of 3) IPR022803 - Ribosomal protein L5 domain; Mitochondrial ribosomal protein L5 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCTTGACATAGCTGGGGTCGGTTTGTACAGGCACCAGCCGCGTCCCGT
Internal bar code:AGTTCAAATCCCTGGTTTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:4983
LEAP-Seq percent confirming:95.5056
LEAP-Seq n confirming:85
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:89

Suggested primers for confirmation by PCR

Suggested primer 1:CGCATCGGTTAGCAAAGTCG
Suggested primer 2:TCCCCCATGCCAGTCATAGA