Insertion junction: CLIP2.070601_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070601
Chromosome:chromosome 12
Location:4051959
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGGCCGTTGGCTTACAGCAACGGAGTCAACTCTTACTCTTAGTTGTTCC
Internal bar code:TATCACAAGTTGTTAACATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:785
LEAP-Seq percent confirming:38.2979
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGTTTGGTTGGATAGGGG
Suggested primer 2:GCGCAAACCTATGGATGCAG