Insertion junction: CLIP2.070601_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070601
Chromosome:chromosome 12
Location:4051961
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g516400 SPL24 Pre-mRNA splicing factor; (1 of 1) PF04146 - YT521-B-like domain (YTH) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTTGGGCATGGCAGACGAGGAAGACCTTCTCTATGAAGACGATTATCCA
Internal bar code:TATCACAAGTTGTTAACATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1113
LEAP-Seq percent confirming:95.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCAAACCTATGGATGCAG
Suggested primer 2:GGGGTTTGGTTGGATAGGGG