Insertion junction: CLIP2.070605_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070605
Chromosome:chromosome 10
Location:2465956
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g435650 HGPT1,HPT1 Hexose/glycerol-3-phosphate transporter; (1 of 2) PTHR11662//PTHR11662:SF272 - SODIUM-DEPENDENT PHOSPHATE TRANSPORTERS // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATTGGGTTTTAGTGACACGTGTTCGGTTGTGCTTACGTGATGCCGAAG
Internal bar code:AGTTGATGGTTTCTATTGGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2039
LEAP-Seq percent confirming:79.5455
LEAP-Seq n confirming:70
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:88

Suggested primers for confirmation by PCR

Suggested primer 1:AAAACTCAAGTGCAGCAGCG
Suggested primer 2:CGCCGCCTATTACCTCACAT