Insertion junction: CLIP2.070607_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070607
Chromosome:chromosome 1
Location:1382137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g007200 (1 of 1) K16675 - palmitoyltransferase ZDHHC9/14/18 (ZDHHC9_14_18) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATATGATTCTGTGTTTGTAGTTGCTCACAACCAAAAGCCTGATATCAGT
Internal bar code:GAGGGCTGCCAGGATTTTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1970
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:AGTGTCAAGGCTACGGTGTG
Suggested primer 2:TCGTCACAGCTCTGCAATGT