Insertion junction: CLIP2.070608_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070608
Chromosome:chromosome 12
Location:3479415
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g497150 3'UTR
Cre12.g497200 FAP216 EF-Hand Flagellar Associated Protein 216 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATATGTGGGGTTCCTGCAGACACGTCGGGCAGAGACAGTTTGTGCGC
Internal bar code:GGTGCATAATGGCAAGATGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:5370
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:58
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:58

Suggested primers for confirmation by PCR

Suggested primer 1:AGATACGCGACACCACCAAG
Suggested primer 2:TGGTTTGAGCGAGGCCTTAG