Insertion junction: CLIP2.070609_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070609
Chromosome:chromosome 7
Location:681638
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g317300 ROC78,MAPKKKK1,SIK1 (1 of 1) PTHR24361:SF268 - SERINE/THREONINE-PROTEIN KINASE 3; Mitogen Activated Protein Kinase Kinase Kinase Kinase gene_edge/mRNA_edge/5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAACCAGCCAGGGCTTACATTTAAGTTGCATGTAAGTAATATCCACAGCG
Internal bar code:AAAGGTAAACTTCGTTGTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:815
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:GGATCACCTTGATGGCCACA
Suggested primer 2:GCAGCCGCCTGTCTGTATAT