Insertion junction: CLIP2.070615_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070615
Chromosome:chromosome 9
Location:5792387
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre09.g411150 (1 of 6) PTHR22916//PTHR22916:SF9 - GLYCOSYLTRANSFERASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGGAACTGGGAGGTCAATGCTGCGGCCGCTTGGGCGTGCTGCCGCCGCT
Internal bar code:GGGCCCCTCGTGGATGGGCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1967
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CGCAGTAGTCTAGGCAGTCG
Suggested primer 2:CGTGCACGTTGTTGCTGTAA