Insertion junction: CLIP2.070615_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070615
Chromosome:chromosome 9
Location:5885508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g411950 (1 of 3) IPR001005//IPR009057//IPR017877//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb-like domain // Myb domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCCTCACGCACCTTTCACCGTCCTCCCTACTGCCCTGACAAGCACCAC
Internal bar code:TTTGTAGACATAGGCGTATCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1870
LEAP-Seq percent confirming:72.9167
LEAP-Seq n confirming:35
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CGAGTGCTGTGATGAGTGGT
Suggested primer 2:CGCTAGCACTCGCATCTACA