Insertion junction: CLIP2.070623_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070623
Chromosome:chromosome 3
Location:306620
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144484 CDPK10 Calcium/calmodulin-dependent protein kinase; (1 of 4) PTHR24349//PTHR24349:SF121 - SERINE/THREONINE-PROTEIN KINASE // SUBFAMILY NOT NAMED 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTACATACCGGAGCGCAGCACTCGCGGTGGCTTTGGTGCCTTCGTTCG
Internal bar code:TTAGTGATCTAGGCAGAGAAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2168
LEAP-Seq percent confirming:94.2857
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TACGGTTTGGTGAAGGTCGG
Suggested primer 2:GGCTCATACTTGCTGCATGC