Insertion junction: CLIP2.070624_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070624
Chromosome:chromosome 1
Location:904303
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g005150 SGA1 Serine glyoxylate aminotransferase; (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGCACGGAGCCTGCCCCCGCTGTCGCCAGCTGCTACTGTGTGACACAA
Internal bar code:AGATTTAGTGAGGTGAACGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1121
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGTCGGGCTGGTAAAGGA
Suggested primer 2:AGGTGGCTGGGTTGATAACG