Insertion junction: CLIP2.070624_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070624
Chromosome:chromosome 1
Location:904313
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g005150 SGA1 Serine glyoxylate aminotransferase; (1 of 1) 2.6.1.44//2.6.1.45//2.6.1.51 - Alanine--glyoxylate transaminase / Alanine--glyoxylate aminotransferase // Serine--glyoxylate transaminase / SGAT // Serine--pyruvate transaminase / Serine--pyruvate aminotransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGTGCAGTCTGCTGAGCCCGTGAGCGCCGCCGTTGTTCGCAAGCTGCA
Internal bar code:AGATTTAGTGAGGTGAACGTAC

Confirmation - LEAP-Seq

LEAP-Seq distance:1355
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTGGCTGGGTTGATAACG
Suggested primer 2:GTTGTCGGGCTGGTAAAGGA