Insertion junction: CLIP2.070625_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070625
Chromosome:chromosome 6
Location:2373416
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268228 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGAAGGCCCTGAATGGCTCAGCGCGATTTAGCCTGGCAAGAGAATAC
Internal bar code:TTAGAATATGACGCGTATTTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:203
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCGTGATGGATCAGGAGGAG
Suggested primer 2:CAGGCAGACAGATAGGCAGG