Insertion junction: CLIP2.070628_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070628
Chromosome:chromosome 12
Location:8377826
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g801474 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCCCCCACGAGCCCAGCACCCACCCGTCTAGGGCCCCGACAACAGCTC
Internal bar code:GGCTGCTTTGATCTGAGGCGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:241
LEAP-Seq percent confirming:70.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CGGCTTTACGCTGTACATGC
Suggested primer 2:TGGCGGAATGTCTCATGCTT