Insertion junction: CLIP2.070629_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070629
Chromosome:chromosome 10
Location:5636905
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458800 SRR31 Scavenger receptor cysteine rich (SRCR) protein; (1 of 20) IPR001190//IPR017448 - SRCR domain // SRCR-like domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTACTGCACCCCCTGACTGCCCCTGAGCTAGCAAGGACTGACACGA
Internal bar code:AATGCCCTCAAATCAAGTAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1073
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:AACTAGCTCGCGCCTCATAC
Suggested primer 2:AGGTGGCTGGGTTGATAACG