Insertion junction: CLIP2.070631_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070631
Chromosome:chromosome 3
Location:3142970
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800315 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCCCCGAGTTTCGAGCTGCCCCTGCGCCCCGCCCTGCGGCCCTCGCGC
Internal bar code:ATCTTCTATTACTGAGGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1705
LEAP-Seq percent confirming:93.1034
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CCTGGCTGTAGTGAAGCACA
Suggested primer 2:TTCCGGCACACAATCTCGAA