Insertion junction: CLIP2.070631_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070631
Chromosome:chromosome 3
Location:3142971
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800315 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGATGCACGCCGCCGCCGTGCGCATGGCCCTCGGAGTTGTAACCATTAT
Internal bar code:ATCTTCTATTACTGAGGGTCTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1476
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCGGCACACAATCTCGAA
Suggested primer 2:CCTGGCTGTAGTGAAGCACA