Insertion junction: CLIP2.070642_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070642
Chromosome:chromosome 17
Location:1332508
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705650 3'UTR
Cre17.g705700 PROB1,GGK1 Glutamate 5-kinase; (1 of 3) 2.7.2.11 - Glutamate 5-kinase / Gamma-glutamyl kinase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCGCATTCGTGAGATTGTTATTGCAGTACGTGCTGGACCAGGTTCGCTC
Internal bar code:ACCGTTGAAGTTTCGGATATGA

Confirmation - LEAP-Seq

LEAP-Seq distance:659
LEAP-Seq percent confirming:9.09091
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:20
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:TGTTCGTCGACAGTGACCAG
Suggested primer 2:GAGCAGCGCTTCATTCCTTG