Insertion junction: CLIP2.070650_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070650
Chromosome:chromosome 7
Location:5147090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g348500 (1 of 1) IPR003029//IPR012340 - S1 domain // Nucleic acid-binding, OB-fold 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCTTATTGGCTCATTATGCGTACCAAGGTCAAGAATAGCTAGGTTTGC
Internal bar code:CACGACCATCTTTTCCCGGCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2518
LEAP-Seq percent confirming:68.4211
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCTAAGAATTCAGCGGCG
Suggested primer 2:GGCAGTAAGGACCCCTGTTC