Insertion junction: CLIP2.070655_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.070655
Chromosome:chromosome 16
Location:4583581
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g671150 (1 of 1) PTHR12770//PTHR12770:SF22 - FAMILY NOT NAMED // UPF0420 PROTEIN C16ORF58 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACCCCTGCCTGCACTGCCGCCTCCACCCGCCCTGTACGCCTCAGCTC
Internal bar code:CATCTTTTCTCACTTGCGCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:165
LEAP-Seq percent confirming:80.9524
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:GTGATGCCGTGTGGTGTAGA
Suggested primer 2:CGCTCTTGTGCAATGGGTTT