Insertion junction: CLIP2.070664_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070664
Chromosome:chromosome 13
Location:1974447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g576550 (1 of 93) 6.3.2.19 - Transferred entry: 2.3.2.23, 2.3.2.27 and 6.2.1.45 3'UTR
Cre13.g801525 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACCAGCGGAGCTGGCTCCCAAGCAACCTGGCAGGAACCGGGTGTGTCA
Internal bar code:GTACTCCGGTAACGTTCCAGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:3967
LEAP-Seq percent confirming:75.3425
LEAP-Seq n confirming:55
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:73

Suggested primers for confirmation by PCR

Suggested primer 1:CTTTCCGTGAGCGCATGATG
Suggested primer 2:GGGAGAGCTGGCCTTGATTT