Insertion junction: CLIP2.070672_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070672
Chromosome:chromosome 11
Location:1528471
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g468650 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCAAATCAATACATCATACCGGCACAAAAAGATTCCCCAATCTTCCTC
Internal bar code:GGGCCCGATAGACTGCGCGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1188
LEAP-Seq percent confirming:30.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAGGAGGTACGGAAACA
Suggested primer 2:GCGCAAGGTAATGGCATCAG