Insertion junction: CLIP2.070679_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.070679
Chromosome:chromosome 17
Location:5563714
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g739600 (1 of 1) PF03988 - Repeat of Unknown Function (DUF347) (DUF347) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCTCGGCTGACTGACGCGGTAGACTGAAAGCTTGAGAGCGTCAAAGAT
Internal bar code:GGCGACACTGGCACTTCGCGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1006
LEAP-Seq percent confirming:88.2353
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CACGTACCTCGATCCAGAGC
Suggested primer 2:ACTGCGGAGAAACGTGTGAT