Insertion junction: CLIP2.070683_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070683
Chromosome:chromosome 14
Location:1480074
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g617450 HSP22E Heat shock protein 22E; (1 of 4) PTHR11527//PTHR11527:SF128 - SMALL HEAT-SHOCK PROTEIN HSP20 FAMILY // SUBFAMILY NOT NAMED 3'UTR
Cre14.g617500 FAP132,RSP14 Radial Spoke Protein 14; (1 of 1) PTHR15599:SF1 - RHABDOID TUMOR DELETION REGION PROTEIN 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCGTACGTGCTTTATATACTGCAACAACATCGCGCTCGCTGCCTCCCA
Internal bar code:AAATTCAAGTATACTCGGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1376
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTCTTTCCCCCACC
Suggested primer 2:GCATATCTTCGAGACGGCCA