Insertion junction: CLIP2.070684_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070684
Chromosome:chromosome 12
Location:42554
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483550 VPE1 (1 of 1) K01369 - legumain (LGMN); Vacuolar processing enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTAGTTCGTACCCCCCCCCCCCTGGACGACCGACCCTGAAGTTTAAGGCC
Internal bar code:AGATCATGCAAGAAATATAAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1833
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:62

Suggested primers for confirmation by PCR

Suggested primer 1:TAACAGCCACGGCATCAGTT
Suggested primer 2:TCAAAGTTCAGGGTCGGTCG