Insertion junction: CLIP2.070684_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070684
Chromosome:chromosome 12
Location:42580
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g483550 VPE1 (1 of 1) K01369 - legumain (LGMN); Vacuolar processing enzyme 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGACCCCCCCTCCGGACCGACCGACCGACCCCCACCACCGTGCAACC
Internal bar code:CTTAGCCGGGTATGCTCGACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3509
LEAP-Seq percent confirming:77.1429
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:70

Suggested primers for confirmation by PCR

Suggested primer 1:TCAAAGTTCAGGGTCGGTCG
Suggested primer 2:TAACAGCCACGGCATCAGTT