Insertion junction: CLIP2.070690_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.070690
Chromosome:chromosome 12
Location:5164915
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre12.g526850 HEL56 (1 of 1) K14810 - ATP-dependent RNA helicase DDX56/DBP9 [EC:3.6.4.13] (DDX56, DBP9); DEAD box ATP-dependent RNA helicase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCCCTCCTCCGCGCCCGCGCCTGTGCCCGCCGCCCCTGCGCCCGCCGCC
Internal bar code:GGTAGTTGACGAATATTGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:148
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:GCCCAAAGTAAACCGAGGGA
Suggested primer 2:GATATGGGAGCGCGAGTTGA