Insertion junction: CLIP2.070700_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.070700
Chromosome:chromosome 16
Location:553884
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692450 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGATGTTACAGAGGGGACAGTCCCAGCACCCGAAGACGCCGAGCCATT
Internal bar code:TTATTAAAGGTAATCATAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1606
LEAP-Seq percent confirming:69.4915
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:59

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGTATGGTGGACAACGAA
Suggested primer 2:GGTGTTACTGCAAAGGCGTG