Insertion junction: CLIP2.070702_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070702
Chromosome:chromosome 16
Location:1635702
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre16.g654350 SPL4 (1 of 1) K13102 - DNA/RNA-binding protein KIN17 (KIN); Splicing factor-like protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGTCCTTAAGATGAAATGGGCAGGTTACTGAAGGCTCCACGCGGCACCT
Internal bar code:AGCACACAGTTGTCTCTCCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:316
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCCACATGAAATTGGGA
Suggested primer 2:GTTCGTCAAGTACCTGGGCA