Insertion junction: CLIP2.070709_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070709
Chromosome:chromosome 17
Location:1318087
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705550 (1 of 1) K13174 - THO complex subunit 5 (THOC5) 3'UTR
Cre17.g705600 (1 of 11) PF00487 - Fatty acid desaturase (FA_desaturase) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCGGCATCAGGGCGCGGTCCCAAAGCTCCTTCCACGTAGTCAGTGCTT
Internal bar code:GTAGCACATTGAAAGAGGCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1637
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTATGGATGCTGTGTGCG
Suggested primer 2:AGGTCGCAGGATTGGTTGAG