Insertion junction: CLIP2.070709_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070709
Chromosome:chromosome 17
Location:1318094
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705550 (1 of 1) K13174 - THO complex subunit 5 (THOC5) 3'UTR
Cre17.g705600 (1 of 11) PF00487 - Fatty acid desaturase (FA_desaturase) 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCTGCGCTGTAAACGGCTCGGGATACCTGATGATGCTCAATGGCGCC
Internal bar code:ACTACTCTGATCCGAAAACGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:5816
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:147
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:147

Suggested primers for confirmation by PCR

Suggested primer 1:AGGTCGCAGGATTGGTTGAG
Suggested primer 2:GCTTATGGATGCTGTGTGCG