Insertion junction: CLIP2.070722_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.070722
Chromosome:chromosome 13
Location:4229266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g591800 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATACAAGCACTCGTTTCGAATATCTTTACAAGTGTCTGTTCAATATCGT
Internal bar code:AGTAGGTTCGGGAACAGTTACG

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:6.89655
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCATGAACGTGTCCTGAA
Suggested primer 2:GCGTCAGTCGAGTCTCTAGC