Insertion junction: CLIP2.070724_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070724
Chromosome:chromosome 4
Location:3890457
Confidence (%):63
Locus systematic id Locus common name Defline Feature
Cre04.g230536 (1 of 5) 1.4.3.13 - Protein-lysine 6-oxidase / Lysyl oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATAGGCCGGTGTGGGCACACTCGGATTCGGCATGGCATGCAGGCGGAAA
Internal bar code:TTGATACATTATCTTTTTACTG

Confirmation - LEAP-Seq

LEAP-Seq distance:61
LEAP-Seq percent confirming:16.6667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAGTCACACACCTGCAA
Suggested primer 2:TGTCACACACATTCGCCGTA