Insertion junction: CLIP2.070732_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070732
Chromosome:chromosome 9
Location:1057288
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401950 (1 of 8) 2.7.11.12 - cGMP-dependent protein kinase / PKG II outside_mRNA

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTGGGCCTCATAAGACAGCCGGGCAAGCCCAGACCGTTGCCCTAAGCAT
Internal bar code:AAGGGCTTATAGTCCTGAGGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2071
LEAP-Seq percent confirming:82.1429
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:GTTACTGGGGCTACACCACC
Suggested primer 2:TGTGACGTGCTGATCCAGAC