Insertion junction: CLIP2.070736_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070736
Chromosome:chromosome 1
Location:6294218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g044700 GST4 Glutathione S-transferase; (1 of 1) PTHR11260//PTHR11260:SF156 - GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAAACTCTGCCCAAAAGTTACGCAAAGACTCCCGTGCCACCCCTGCA
Internal bar code:CGATTATCGGTGGCCAGACAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1230
LEAP-Seq percent confirming:89.1892
LEAP-Seq n confirming:66
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTGATGAGCTGGTTGGT
Suggested primer 2:TCCATCACACGCTTCGTCAA