Insertion junction: CLIP2.070737_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.070737
Chromosome:chromosome 12
Location:2659686
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g505450 HFO17 (1 of 33) K11254 - histone H4 (H4); Histone H4 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGCCACTACCTGCACACGCCTCCTCTTGTGCTCAGCATTACAACACCG
Internal bar code:GACTTGACATCGCAAAAGGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:3948
LEAP-Seq percent confirming:86.1635
LEAP-Seq n confirming:137
LEAP-Seq n nonconfirming:22
LEAP-Seq n unique pos:159

Suggested primers for confirmation by PCR

Suggested primer 1:ATTACCAAGCCCGCTATCCG
Suggested primer 2:AGTGCGTGAGACGACAACAT