Insertion junction: CLIP2.070740_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.070740
Chromosome:chromosome 6
Location:4192063
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278237 CPLD34 Putative carbohydrate/purine kinase; (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATGAACGTCGACCCGAGCCCCGCACATTTACCTCCCCACCCTGGATGGC
Internal bar code:GTTCTTGGTCGCTCGCTCTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:783
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCTGAGATGGCGGTGTT
Suggested primer 2:AGGGGGAAAGCTACTTTGGC