Insertion junction: CLIP2.070750_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.070750
Chromosome:chromosome 3
Location:1940561
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g155200 CHM1 Chorismate mutase; (1 of 1) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCCTCAGGGTGGTAGCCCCCGTGGCTCGCCCTGTCCGCACAGGTCAAA
Internal bar code:TTATGCACCACTAGGGGCAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2772
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAATCCCAGAGCTAAGCGCG
Suggested primer 2:GGTCGCTATAAGGGCCAGTC